Workspaces

Each user has a unique user workspace to manage resources such as pipelines, compute environments, and credentials. You can also create multiple workspaces within an organization context and associate each of these workspaces with dedicated teams of users, while providing fine-grained access control for each of the teams.

Organization workspaces extend the functionality of user workspaces by adding the ability to fine-tune access levels for specific members, collaborators, or teams. This is achieved by managing participants in the organization workspaces.

Organizations consist of members, while workspaces consist of participants.

A workspace participant may be a member of the workspace organization or a collaborator within that workspace only. Collaborators count toward the total number of workspace participants. See Usage limits.

Create a new workspace

Organization owners and admins can create a new workspace within an organization:

1. Go to the Workspaces tab of the organization page.
2. Select Add Workspace.
3. Enter the Name and Full name for the workspace.
4. Optionally, add a Description for the workspace.
5. Under Visibility, select either Private or Shared. Private visibility means that workspace pipelines are only accessible to workspace participants.
6. Select Add.

As a workspace owner, you can modify optional workspace fields after workspace creation. You can either select Edit on an organization's workspaces list or the Settings tab within the workspace page.

Apart from the Participants tab, the organization workspace is similar to the user workspace. As such, the relation to runs, actions, compute environments, and credentials is the same.

Edit a workspace

From version 23.2, workspace owners can edit their workspace name, either from the workspace settings tab or the Admin panel.

Open the Settings tab on the workspace page and select Edit Workspace. Make your updates and select Update to save changes.

Add a new participant

A new workspace participant can be an existing organization member, team, or collaborator. To add a new participant to a workspace:

1. Go to the Participants tab in the workspace menu.
2. Select Add participant.
3. Enter the Name of the new participant.
4. Optionally, update the participant role.

Workspace run monitoring

To allow users executing pipelines from the command line to share their runs with a given workspace, see deployment options.

Seqera Platform introduces the concept of shared workspaces as a solution for synchronization and resource sharing within an organization. A shared workspace enables the creation of pipelines in a centralized location, making them accessible to all members of an organization.

The benefits of using a shared workspace within an organization include:

• Define once and share everywhere: Set up shared resources once and automatically share them across the organization.
• Centralize the management of key resources: Organization administrators can ensure the correct pipeline configuration is used in all areas of an organization without the need to replicate pipelines across multiple workspaces.
• Immediate update adoption: Updated parameters for a shared pipeline become immediately available across the entire organization, reducing the risk of pipeline discrepancies.
• Computational resource provision: Pipelines in shared workflows can be shared along with the required computational resources. This eliminates the need to duplicate resource setup in individual workspaces across the organization. Shared workspaces centralize and simplify resource sharing within an organization.

Create a shared workspace

Creating a shared workspace is similar to the creation of a private workspace, with the exception of the Visibility option, which must be set to Shared.

Create a shared pipeline

When you create a pipeline in a shared workspace, associating it with a compute environment is optional.

If a compute environment from the shared workspace is associated with the pipeline, it will be available to users in other organization workspaces to launch the shared pipeline with the associated compute environment by default.

Use shared pipelines from a private workspace

Once a pipeline is set up in a shared workspace and associated with a compute environment in that workspace, any user can launch the pipeline from an organization workspace using the shared workspace's compute environment. This eliminates the need for users to replicate shared compute environments in their private workspaces.

The shared compute environment will not be available to launch other pipelines limited to that specific private workspace.

If a pipeline from a shared workspace is shared without an associated compute environment, users can run it from other organization workspaces. By default, the primary compute environment of the launching workspace will be selected.

Make shared pipelines visible in a private workspace

Pipelines from all shared workspaces are visible when the visibility is set to Shared workspaces.

To view pipelines from shared workspaces, go to the Launchpad and set the Filter > Pipelines from option to This and shared workspaces.