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WhatsHap

Phasing genomic variants using DNA reads (aka read-based phasing, or haplotype assembly)

https://whatshap.readthedocs.io/

The module is currently restricted to the output from whatshap stats --tsv.

File search patterns

whatshap/stats:
contents: "#sample\tchromosome\tfile_name\tvariants\tphased\tunphased\tsingletons"
num_lines: 1